IL_9B0P_036

3D structure

PDB id

9B0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human Hibernating class1 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

GAAGGUGGCU*AGUGUUACAGC

Length

21 nucleotides

Bulged bases

9B0P|1|L5|G|748, 9B0P|1|L5|C|916

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B0P|1|L5|G|745
9B0P|1|L5|A|746
9B0P|1|L5|A|747
9B0P|1|L5|G|748
9B0P|1|L5|G|749
9B0P|1|L5|U|750
9B0P|1|L5|G|751
9B0P|1|L5|G|752
9B0P|1|L5|C|753
9B0P|1|L5|U|754
*
9B0P|1|L5|A|909
9B0P|1|L5|G|910
9B0P|1|L5|U|911
9B0P|1|L5|G|912
9B0P|1|L5|U|913
9B0P|1|L5|U|914
9B0P|1|L5|A|915
9B0P|1|L5|C|916
9B0P|1|L5|A|917
9B0P|1|L5|G|918
9B0P|1|L5|C|919

Current chains

Chain L5

28S rRNA [Homo sapiens]

Nearby chains

Chain LM

60S ribosomal protein L14

Chain LS

60S ribosomal protein L18a