IL_9B0P_125

3D structure

PDB id

9B0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human Hibernating class1 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

GACAU*AUCGUU

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B0P|1|L5|G|3946
9B0P|1|L5|A|3947
9B0P|1|L5|C|3948
9B0P|1|L5|A|3949
9B0P|1|L5|U|3950
*
9B0P|1|L5|A|4062
9B0P|1|L5|U|4063
9B0P|1|L5|C|4064
9B0P|1|L5|G|4065
9B0P|1|L5|U|4066
9B0P|1|L5|U|4067

Current chains

Chain L5

28S rRNA [Homo sapiens]

Nearby chains

Chain Li

60S ribosomal protein L36

Chain SB

40S ribosomal protein S3a