IL_9B0P_160

3D structure

PDB id

9B0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human Hibernating class1 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

GGAAACGG*CUCGCC

Length

14 nucleotides

Bulged bases

9B0P|1|L5|C|4895

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B0P|1|L5|G|4890
9B0P|1|L5|G|4891
9B0P|1|L5|A|4892
9B0P|1|L5|A|4893
9B0P|1|L5|A|4894
9B0P|1|L5|C|4895
9B0P|1|L5|G|4896
9B0P|1|L5|G|4897
*
9B0P|1|L5|C|4924
9B0P|1|L5|U|4925
9B0P|1|L5|C|4926
9B0P|1|L5|G|4927
9B0P|1|L5|C|4928
9B0P|1|L5|C|4929

Current chains

Chain L5

28S rRNA [Homo sapiens]

Nearby chains

Chain LE

Large ribosomal subunit protein eL6

Chain LM

60S ribosomal protein L14

Chain LO

60S ribosomal protein L13a