IL_9B0P_162
3D structure
- PDB id
- 9B0P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human Hibernating class1 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- GCG*CC
- Length
- 5 nucleotides
- Bulged bases
- 9B0P|1|L5|C|4900
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B0P_162 not in the Motif Atlas
- Geometric match to IL_8P9A_297
- Geometric discrepancy: 0.3099
- The information below is about IL_8P9A_297
- Detailed Annotation
- Single bulged C
- Broad Annotation
- No text annotation
- Motif group
- IL_05642.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 50
Unit IDs
9B0P|1|L5|G|4899
9B0P|1|L5|C|4900
9B0P|1|L5|G|4901
*
9B0P|1|L5|C|4920
9B0P|1|L5|C|4921
Current chains
- Chain L5
- 28S rRNA [Homo sapiens]
Nearby chains
No other chains within 10ÅColoring options: