IL_9B0Q_063

3D structure

PDB id

9B0Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human top-back di-ribosome structure (Composite map)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUCGCAGACCCGACGCCCGCCACG*CG

Length

26 nucleotides

Bulged bases

9B0Q|1|L5|C|1702, 9B0Q|1|L5|C|1707, 9B0Q|1|L5|G|1708

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B0Q|1|L5|C|1694
9B0Q|1|L5|U|1695
9B0Q|1|L5|C|1696
9B0Q|1|L5|G|1697
9B0Q|1|L5|C|1698
9B0Q|1|L5|A|1699
9B0Q|1|L5|G|1700
9B0Q|1|L5|A|1701
9B0Q|1|L5|C|1702
9B0Q|1|L5|C|1703
9B0Q|1|L5|C|1704
9B0Q|1|L5|G|1705
9B0Q|1|L5|A|1706
9B0Q|1|L5|C|1707
9B0Q|1|L5|G|1708
9B0Q|1|L5|C|1709
9B0Q|1|L5|C|1714
9B0Q|1|L5|C|1715
9B0Q|1|L5|G|1716
9B0Q|1|L5|C|1717
9B0Q|1|L5|C|1718
9B0Q|1|L5|A|1719
9B0Q|1|L5|C|1720
9B0Q|1|L5|G|1721
*
9B0Q|1|L5|C|1841
9B0Q|1|L5|G|1842

Current chains

Chain L5

28S rRNA [Homo sapiens]

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LF

60S ribosomal protein L7

Chain LQ

60S ribosomal protein L18

Chain LT

60S ribosomal protein L21

Chain Lb

Large ribosomal subunit protein eL29