IL_9B0W_103
3D structure
- PDB id
- 9B0W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human eEF2-A/P-P/E state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.66 Å
Loop
- Sequence
- CGAUC*GGGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B0W_103 not in the Motif Atlas
- Homologous match to IL_8P9A_295
- Geometric discrepancy: 0.1981
- The information below is about IL_8P9A_295
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_15190.1
- Basepair signature
- cWW-tSH-tHS-tHS-cWW
- Number of instances in this motif group
- 22
Unit IDs
9B0W|1|L5|C|2589
9B0W|1|L5|G|2590
9B0W|1|L5|A|2591
9B0W|1|L5|U|2592
9B0W|1|L5|C|2593
*
9B0W|1|L5|G|2752
9B0W|1|L5|G|2753
9B0W|1|L5|G|2754
9B0W|1|L5|A|2755
9B0W|1|L5|G|2756
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LA
- 60S ribosomal protein L8
- Chain LZ
- 60S ribosomal protein L27
- Chain Lg
- 60S ribosomal protein L34
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