IL_9B0W_133

3D structure

PDB id

9B0W (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human eEF2-A/P-P/E state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.66 Å

Loop

Sequence

GACAUGAG*CUGAUCGUU

Length

17 nucleotides

Bulged bases

9B0W|1|L5|A|3947

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B0W|1|L5|G|3946
9B0W|1|L5|A|3947
9B0W|1|L5|C|3948
9B0W|1|L5|A|3949
9B0W|1|L5|U|3950
9B0W|1|L5|G|3951
9B0W|1|L5|A|3952
9B0W|1|L5|G|3953
*
9B0W|1|L5|C|4059
9B0W|1|L5|U|4060
9B0W|1|L5|G|4061
9B0W|1|L5|A|4062
9B0W|1|L5|U|4063
9B0W|1|L5|C|4064
9B0W|1|L5|G|4065
9B0W|1|L5|U|4066
9B0W|1|L5|U|4067

Current chains

Chain L5

28S rRNA

Nearby chains

Chain Li

60S ribosomal protein L36

Chain SB

40S ribosomal protein S3a