IL_9B4Z_030
3D structure
- PDB id
- 9B4Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome complex (N1-methylated 16S A1408 + arbekacin)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- UGAAAUCC*GAACUG
- Length
- 14 nucleotides
- Bulged bases
- 9B4Z|1|AA|U|632
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B4Z_030 not in the Motif Atlas
- Geometric match to IL_8B0X_029
- Geometric discrepancy: 0.1058
- The information below is about IL_8B0X_029
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04211.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
9B4Z|1|AA|U|605
9B4Z|1|AA|G|606
9B4Z|1|AA|A|607
9B4Z|1|AA|A|608
9B4Z|1|AA|A|609
9B4Z|1|AA|U|610
9B4Z|1|AA|C|611
9B4Z|1|AA|C|612
*
9B4Z|1|AA|G|628
9B4Z|1|AA|A|629
9B4Z|1|AA|A|630
9B4Z|1|AA|C|631
9B4Z|1|AA|U|632
9B4Z|1|AA|G|633
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AD
- 30S ribosomal protein S4
- Chain AH
- 30S ribosomal protein S8
- Chain AP
- 30S ribosomal protein S16
- Chain AQ
- 30S ribosomal protein S17
Coloring options: