IL_9B51_038
3D structure
- PDB id
- 9B51 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome complex (N1-methylated 16S A1408 + G418)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- GGAGUACG*UAAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B51_038 not in the Motif Atlas
- Geometric match to IL_8B0X_037
- Geometric discrepancy: 0.0576
- The information below is about IL_8B0X_037
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_84044.1
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
9B51|1|AA|G|887
9B51|1|AA|G|888
9B51|1|AA|A|889
9B51|1|AA|G|890
9B51|1|AA|U|891
9B51|1|AA|A|892
9B51|1|AA|C|893
9B51|1|AA|G|894
*
9B51|1|AA|U|905
9B51|1|AA|A|906
9B51|1|AA|A|907
9B51|1|AA|A|908
9B51|1|AA|A|909
9B51|1|AA|C|910
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AL
- 30S ribosomal protein S12
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