IL_9B51_065

3D structure

PDB id

9B51 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complex (N1-methylated 16S A1408 + G418)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UAG*CG

Length

5 nucleotides

Bulged bases

9B51|1|AA|A|1441

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9B51_065 not in the Motif Atlas

Geometric match to IL_9E9Q_004

Geometric discrepancy: 0.28

The information below is about IL_9E9Q_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_14190.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

160

Unit IDs

9B51|1|AA|U|1440
9B51|1|AA|A|1441
9B51|1|AA|G|1442
*
9B51|1|AA|C|1460
9B51|1|AA|G|1461

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AT

30S ribosomal protein S20

Chain BP

50S ribosomal protein L19