IL_9BCU_001
3D structure
- PDB id
- 9BCU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Thermococcus kodakarensis FttA-dependent transcription pre-termination complex containing 52 nt RNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- GATC*GATC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9BCU|1|5|DG|9
9BCU|1|5|DA|10
9BCU|1|5|DT|11
9BCU|1|5|DC|12
*
9BCU|1|6|DG|27
9BCU|1|6|DA|28
9BCU|1|6|DT|29
9BCU|1|6|DC|30
Current chains
- Chain 5
- non-template strand DNA
- Chain 6
- template strand DNA
Nearby chains
- Chain A
- DNA-directed RNA polymerase subunit A'
- Chain B
- DNA-directed RNA polymerase subunit B
- Chain G
- Transcription elongation factor Spt5
- Chain I
- Transcription elongation factor Spt4
- Chain J
- Transcription termination factor FttA
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