IL_9BDL_013

3D structure

PDB id

9BDL (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with angiogenin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GACUU*AUGCCGAC

Length

13 nucleotides

Bulged bases

9BDL|1|A18S|C|142

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDL|1|A18S|G|130
9BDL|1|A18S|A|141
9BDL|1|A18S|C|142
9BDL|1|A18S|U|143
9BDL|1|A18S|U|144
*
9BDL|1|A18S|A|175
9BDL|1|A18S|U|176
9BDL|1|A18S|G|177
9BDL|1|A18S|C|178
9BDL|1|A18S|C|179
9BDL|1|A18S|G|180
9BDL|1|A18S|A|181
9BDL|1|A18S|C|182

Current chains

Chain A18S

18S rRNA

Nearby chains

Chain AS06

40S ribosomal protein S6