IL_9BDL_031
3D structure
- PDB id
- 9BDL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome with angiogenin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- GAG*CGAGGAUC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9BDL_031 not in the Motif Atlas
- Homologous match to IL_8C3A_420
- Geometric discrepancy: 0.1686
- The information below is about IL_8C3A_420
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_14882.1
- Basepair signature
- cWW-tSH-L-cWW-L-L-R-L
- Number of instances in this motif group
- 1
Unit IDs
9BDL|1|A18S|G|563
9BDL|1|A18S|A|564
9BDL|1|A18S|G|565
*
9BDL|1|A18S|C|585
9BDL|1|A18S|G|586
9BDL|1|A18S|A|587
9BDL|1|A18S|G|588
9BDL|1|A18S|G|589
9BDL|1|A18S|A|590
9BDL|1|A18S|U|591
9BDL|1|A18S|C|592
Current chains
- Chain A18S
- 18S rRNA
Nearby chains
- Chain AS09
- 40S ribosomal protein S9
- Chain AS30
- 40S ribosomal protein S30
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