IL_9BDL_067

3D structure

PDB id

9BDL (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with angiogenin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

AUUG*CUCGAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDL|1|A18S|A|1287
9BDL|1|A18S|U|1288
9BDL|1|A18S|U|1289
9BDL|1|A18S|G|1290
*
9BDL|1|A18S|C|1309
9BDL|1|A18S|U|1310
9BDL|1|A18S|C|1311
9BDL|1|A18S|G|1312
9BDL|1|A18S|A|1313
9BDL|1|A18S|U|1314

Current chains

Chain A18S

18S rRNA

Nearby chains

Chain AS10

40S ribosomal protein S10

Chain AS12

40S ribosomal protein S12

Chain AS29

40S ribosomal protein S29