IL_9BDL_218

3D structure

PDB id

9BDL (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with angiogenin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GGGAG*CGCCGGUGAAAUACC

Length

20 nucleotides

Bulged bases

9BDL|1|A28S|A|3972

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDL|1|A28S|G|3969
9BDL|1|A28S|G|3970
9BDL|1|A28S|G|3971
9BDL|1|A28S|A|3972
9BDL|1|A28S|G|3973
*
9BDL|1|A28S|C|4038
9BDL|1|A28S|G|4039
9BDL|1|A28S|C|4040
9BDL|1|A28S|C|4041
9BDL|1|A28S|G|4042
9BDL|1|A28S|G|4043
9BDL|1|A28S|U|4044
9BDL|1|A28S|G|4045
9BDL|1|A28S|A|4046
9BDL|1|A28S|A|4047
9BDL|1|A28S|A|4048
9BDL|1|A28S|U|4049
9BDL|1|A28S|A|4050
9BDL|1|A28S|C|4051
9BDL|1|A28S|C|4052

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain ETRN

Transfer RNA; tRNA