IL_9BDL_286

3D structure

PDB id

9BDL (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with angiogenin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GGAAACGGGGC*GCCCUCUCGCC

Length

22 nucleotides

Bulged bases

9BDL|1|A28S|C|4895, 9BDL|1|A28S|C|4921

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDL|1|A28S|G|4890
9BDL|1|A28S|G|4891
9BDL|1|A28S|A|4892
9BDL|1|A28S|A|4893
9BDL|1|A28S|A|4894
9BDL|1|A28S|C|4895
9BDL|1|A28S|G|4896
9BDL|1|A28S|G|4897
9BDL|1|A28S|G|4898
9BDL|1|A28S|G|4899
9BDL|1|A28S|C|4902
*
9BDL|1|A28S|G|4919
9BDL|1|A28S|C|4920
9BDL|1|A28S|C|4921
9BDL|1|A28S|C|4922
9BDL|1|A28S|U|4923
9BDL|1|A28S|C|4924
9BDL|1|A28S|U|4925
9BDL|1|A28S|C|4926
9BDL|1|A28S|G|4927
9BDL|1|A28S|C|4928
9BDL|1|A28S|C|4929

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain AL06

60S ribosomal protein L6

Chain AL14

Large ribosomal subunit protein eL14

Chain AL16

Large ribosomal subunit protein uL13