IL_9BDN_015

3D structure

PDB id

9BDN (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with angiogenin and tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAUU*ACCUCGGG

Length

12 nucleotides

Bulged bases

9BDN|1|A18S|U|305, 9BDN|1|A18S|G|307

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDN|1|A18S|C|216
9BDN|1|A18S|A|217
9BDN|1|A18S|U|218
9BDN|1|A18S|U|219
*
9BDN|1|A18S|A|302
9BDN|1|A18S|C|303
9BDN|1|A18S|C|304
9BDN|1|A18S|U|305
9BDN|1|A18S|C|306
9BDN|1|A18S|G|307
9BDN|1|A18S|G|308
9BDN|1|A18S|G|309

Current chains

Chain A18S

18S rRNA

Nearby chains

Chain AS04

40S ribosomal protein S4

Chain AS08

40S ribosomal protein S8