IL_9BDN_032

3D structure

PDB id

9BDN (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with angiogenin and tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AGGGCAAGUC*GCU

Length

13 nucleotides

Bulged bases

9BDN|1|A18S|U|607

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDN|1|A18S|A|599
9BDN|1|A18S|G|600
9BDN|1|A18S|G|601
9BDN|1|A18S|G|602
9BDN|1|A18S|C|603
9BDN|1|A18S|A|604
9BDN|1|A18S|A|605
9BDN|1|A18S|G|606
9BDN|1|A18S|U|607
9BDN|1|A18S|C|608
*
9BDN|1|A18S|G|635
9BDN|1|A18S|C|636
9BDN|1|A18S|U|637

Current chains

Chain A18S

18S rRNA

Nearby chains

Chain AS02

40S ribosomal protein S2

Chain AS03

40S ribosomal protein S3

Chain AS09

40S ribosomal protein S9

Chain AS23

40S ribosomal protein S23

Chain AS30

40S ribosomal protein S30