IL_9BDN_220

3D structure

PDB id

9BDN (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with angiogenin and tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GACAUGA*UGAUCGUU

Length

15 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDN|1|A28S|G|3946
9BDN|1|A28S|A|3947
9BDN|1|A28S|C|3948
9BDN|1|A28S|A|3949
9BDN|1|A28S|U|3950
9BDN|1|A28S|G|3951
9BDN|1|A28S|A|3952
*
9BDN|1|A28S|U|4060
9BDN|1|A28S|G|4061
9BDN|1|A28S|A|4062
9BDN|1|A28S|U|4063
9BDN|1|A28S|C|4064
9BDN|1|A28S|G|4065
9BDN|1|A28S|U|4066
9BDN|1|A28S|U|4067

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain AL36

60S ribosomal protein L36

Chain AS01

40S ribosomal protein S3a