IL_9BDN_222

3D structure

PDB id

9BDN (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with angiogenin and tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGGAGG*CCGCCGGUGAAAUACC

Length

22 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDN|1|A28S|G|3969
9BDN|1|A28S|G|3970
9BDN|1|A28S|G|3971
9BDN|1|A28S|A|3972
9BDN|1|A28S|G|3973
9BDN|1|A28S|G|3974
*
9BDN|1|A28S|C|4037
9BDN|1|A28S|C|4038
9BDN|1|A28S|G|4039
9BDN|1|A28S|C|4040
9BDN|1|A28S|C|4041
9BDN|1|A28S|G|4042
9BDN|1|A28S|G|4043
9BDN|1|A28S|U|4044
9BDN|1|A28S|G|4045
9BDN|1|A28S|A|4046
9BDN|1|A28S|A|4047
9BDN|1|A28S|A|4048
9BDN|1|A28S|U|4049
9BDN|1|A28S|A|4050
9BDN|1|A28S|C|4051
9BDN|1|A28S|C|4052

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain ETRN

Transfer RNA; tRNA