IL_9BDN_258

3D structure

PDB id

9BDN (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with angiogenin and tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UCGUACG*UUGAAA

Length

13 nucleotides

Bulged bases

9BDN|1|A28S|G|5041

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDN|1|A28S|U|5003
9BDN|1|A28S|C|5004
9BDN|1|A28S|G|5005
9BDN|1|A28S|U|5006
9BDN|1|A28S|A|5007
9BDN|1|A28S|C|5008
9BDN|1|A28S|G|5009
*
9BDN|1|A28S|U|5039
9BDN|1|A28S|U|5040
9BDN|1|A28S|G|5041
9BDN|1|A28S|A|5042
9BDN|1|A28S|A|5043
9BDN|1|A28S|A|5044

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain AL03

60S ribosomal protein L3

Chain AL24

Ribosomal protein L24

Chain AL31

60S ribosomal protein L31