IL_9BDN_283

3D structure

PDB id

9BDN (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with angiogenin and tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGCCACCCC*GGGGGGC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDN|1|A28S|G|1074
9BDN|1|A28S|G|1075
9BDN|1|A28S|C|1076
9BDN|1|A28S|C|1077
9BDN|1|A28S|A|1078
9BDN|1|A28S|C|1079
9BDN|1|A28S|C|1080
9BDN|1|A28S|C|1081
9BDN|1|A28S|C|1082
*
9BDN|1|A28S|G|1217
9BDN|1|A28S|G|1218
9BDN|1|A28S|G|1219
9BDN|1|A28S|G|1233
9BDN|1|A28S|G|1234
9BDN|1|A28S|G|1235
9BDN|1|A28S|C|1236

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain AL04

60S ribosomal protein L4

Chain AL06

60S ribosomal protein L6

Chain AL07

60S ribosomal protein L7

Chain AL29

Large ribosomal subunit protein eL29