IL_9BDN_286

3D structure

PDB id

9BDN (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with angiogenin and tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGGGG*CGCCGUG

Length

12 nucleotides

Bulged bases

9BDN|1|A28S|G|1359, 9BDN|1|A28S|C|1378

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDN|1|A28S|C|1357
9BDN|1|A28S|G|1358
9BDN|1|A28S|G|1359
9BDN|1|A28S|G|1360
9BDN|1|A28S|G|1361
*
9BDN|1|A28S|C|1376
9BDN|1|A28S|G|1377
9BDN|1|A28S|C|1378
9BDN|1|A28S|C|1379
9BDN|1|A28S|G|1380
9BDN|1|A28S|U|1381
9BDN|1|A28S|G|1382

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain AL04

60S ribosomal protein L4

Chain AL13

Large ribosomal subunit protein eL13

Chain AL15

60S ribosomal protein L15

Chain AL28

60S ribosomal protein L27a