Loop IL_9BDN

3D structure

PDB id: 9BDN (explore in PDB, NAKB, or RNA 3D Hub)
Description: 80S ribosome with angiogenin and tRNAAla
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å

Loop

Sequence: GACAUGAGAGGUGUAGAAUAAGUGGGAGG*CCGCCGGUGAAAUACCACUACUCUGAUCGUU
Length: 60 nucleotides
Bulged bases: None detected
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

9BDN|1|A28S|G|3946
9BDN|1|A28S|A|3947
9BDN|1|A28S|C|3948
9BDN|1|A28S|A|3949
9BDN|1|A28S|U|3950
9BDN|1|A28S|G|3951
9BDN|1|A28S|A|3952
9BDN|1|A28S|G|3953
9BDN|1|A28S|A|3954
9BDN|1|A28S|G|3955
9BDN|1|A28S|G|3956
9BDN|1|A28S|U|3957
9BDN|1|A28S|G|3958
9BDN|1|A28S|U|3959
9BDN|1|A28S|A|3960
9BDN|1|A28S|G|3961
9BDN|1|A28S|A|3962
9BDN|1|A28S|A|3963
9BDN|1|A28S|U|3964
9BDN|1|A28S|A|3965
9BDN|1|A28S|A|3966
9BDN|1|A28S|G|3967
9BDN|1|A28S|U|3968
9BDN|1|A28S|G|3969
9BDN|1|A28S|G|3970
9BDN|1|A28S|G|3971
9BDN|1|A28S|A|3972
9BDN|1|A28S|G|3973
9BDN|1|A28S|G|3974
*
9BDN|1|A28S|C|4037
9BDN|1|A28S|C|4038
9BDN|1|A28S|G|4039
9BDN|1|A28S|C|4040
9BDN|1|A28S|C|4041
9BDN|1|A28S|G|4042
9BDN|1|A28S|G|4043
9BDN|1|A28S|U|4044
9BDN|1|A28S|G|4045
9BDN|1|A28S|A|4046
9BDN|1|A28S|A|4047
9BDN|1|A28S|A|4048
9BDN|1|A28S|U|4049
9BDN|1|A28S|A|4050
9BDN|1|A28S|C|4051
9BDN|1|A28S|C|4052
9BDN|1|A28S|A|4053
9BDN|1|A28S|C|4054
9BDN|1|A28S|U|4055
9BDN|1|A28S|A|4056
9BDN|1|A28S|C|4057
9BDN|1|A28S|U|4058
9BDN|1|A28S|C|4059
9BDN|1|A28S|U|4060
9BDN|1|A28S|G|4061
9BDN|1|A28S|A|4062
9BDN|1|A28S|U|4063
9BDN|1|A28S|C|4064
9BDN|1|A28S|G|4065
9BDN|1|A28S|U|4066
9BDN|1|A28S|U|4067

Current chains

Chain A28S: 28S rRNA

Nearby chains

Chain AL36: 60S ribosomal protein L36
Chain AS01: 40S ribosomal protein S3a
Chain ETRN: Transfer RNA; tRNA

IL_9BDN_290