IL_9BDN_298

3D structure

PDB id

9BDN (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with angiogenin and tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UUGAAAAAAUU*ACCGCAGCUA

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDN|1|A18S|U|805
9BDN|1|A18S|U|806
9BDN|1|A18S|G|807
9BDN|1|A18S|A|808
9BDN|1|A18S|A|809
9BDN|1|A18S|A|810
9BDN|1|A18S|A|811
9BDN|1|A18S|A|812
9BDN|1|A18S|A|813
9BDN|1|A18S|U|814
9BDN|1|A18S|U|815
*
9BDN|1|A18S|A|849
9BDN|1|A18S|C|850
9BDN|1|A18S|C|851
9BDN|1|A18S|G|852
9BDN|1|A18S|C|853
9BDN|1|A18S|A|854
9BDN|1|A18S|G|855
9BDN|1|A18S|C|856
9BDN|1|A18S|U|857
9BDN|1|A18S|A|858

Current chains

Chain A18S

18S rRNA

Nearby chains

Chain AS04

40S ribosomal protein S4

Chain AS09

40S ribosomal protein S9

Chain AS11

40S ribosomal protein S11

Chain AS22

40S ribosomal protein S15a