IL_9BDN_299

3D structure

PDB id

9BDN (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with angiogenin and tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GACAGGA*UUC

Length

10 nucleotides

Bulged bases

9BDN|1|A18S|A|1284, 9BDN|1|A18S|G|1285, 9BDN|1|A18S|G|1286

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDN|1|A18S|G|1281
9BDN|1|A18S|A|1282
9BDN|1|A18S|C|1283
9BDN|1|A18S|A|1284
9BDN|1|A18S|G|1285
9BDN|1|A18S|G|1286
9BDN|1|A18S|A|1287
*
9BDN|1|A18S|U|1314
9BDN|1|A18S|U|1315
9BDN|1|A18S|C|1316

Current chains

Chain A18S

18S rRNA

Nearby chains

Chain AS10

40S ribosomal protein S10

Chain AS12

40S ribosomal protein S12