IL_9BDP_012

3D structure

PDB id

9BDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GACUU*AUGCCGAC

Length

13 nucleotides

Bulged bases

9BDP|1|A18S|C|142

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDP|1|A18S|G|130
9BDP|1|A18S|A|141
9BDP|1|A18S|C|142
9BDP|1|A18S|U|143
9BDP|1|A18S|U|144
*
9BDP|1|A18S|A|175
9BDP|1|A18S|U|176
9BDP|1|A18S|G|177
9BDP|1|A18S|C|178
9BDP|1|A18S|C|179
9BDP|1|A18S|G|180
9BDP|1|A18S|A|181
9BDP|1|A18S|C|182

Current chains

Chain A18S

18S rRNA

Nearby chains

Chain AS06

40S ribosomal protein S6