IL_9BDP_016

3D structure

PDB id

9BDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CAUU*ACCUCGGG

Length

12 nucleotides

Bulged bases

9BDP|1|A18S|U|305, 9BDP|1|A18S|G|307

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDP|1|A18S|C|216
9BDP|1|A18S|A|217
9BDP|1|A18S|U|218
9BDP|1|A18S|U|219
*
9BDP|1|A18S|A|302
9BDP|1|A18S|C|303
9BDP|1|A18S|C|304
9BDP|1|A18S|U|305
9BDP|1|A18S|C|306
9BDP|1|A18S|G|307
9BDP|1|A18S|G|308
9BDP|1|A18S|G|309

Current chains

Chain A18S

18S rRNA

Nearby chains

Chain AS04

40S ribosomal protein S4

Chain AS08

40S ribosomal protein S8