IL_9BDP_023
3D structure
- PDB id
- 9BDP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAla
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GGG*CGAUUC
- Length
- 9 nucleotides
- Bulged bases
- 9BDP|1|A18S|U|428
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9BDP_023 not in the Motif Atlas
- Homologous match to IL_8C3A_412
- Geometric discrepancy: 0.1424
- The information below is about IL_8C3A_412
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_49054.1
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
9BDP|1|A18S|G|411
9BDP|1|A18S|G|412
9BDP|1|A18S|G|413
*
9BDP|1|A18S|C|424
9BDP|1|A18S|G|425
9BDP|1|A18S|A|426
9BDP|1|A18S|U|427
9BDP|1|A18S|U|428
9BDP|1|A18S|C|429
Current chains
- Chain A18S
- 18S rRNA
Nearby chains
- Chain AS04
- 40S ribosomal protein S4
- Chain AS09
- 40S ribosomal protein S9
- Chain AS23
- 40S ribosomal protein S23
Coloring options: