IL_9BDP_066

3D structure

PDB id

9BDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

AUUG*CUCGAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDP|1|A18S|A|1287
9BDP|1|A18S|U|1288
9BDP|1|A18S|U|1289
9BDP|1|A18S|G|1290
*
9BDP|1|A18S|C|1309
9BDP|1|A18S|U|1310
9BDP|1|A18S|C|1311
9BDP|1|A18S|G|1312
9BDP|1|A18S|A|1313
9BDP|1|A18S|U|1314

Current chains

Chain A18S

18S rRNA

Nearby chains

Chain AS10

40S ribosomal protein S10

Chain AS12

40S ribosomal protein S12

Chain AS29

40S ribosomal protein S29