IL_9BDP_074

3D structure

PDB id

9BDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CUAACUA*UUCUUAG

Length

14 nucleotides

Bulged bases

9BDP|1|A18S|C|1403, 9BDP|1|A18S|U|1404

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDP|1|A18S|C|1399
9BDP|1|A18S|U|1400
9BDP|1|A18S|A|1401
9BDP|1|A18S|A|1402
9BDP|1|A18S|C|1403
9BDP|1|A18S|U|1404
9BDP|1|A18S|A|1405
*
9BDP|1|A18S|U|1441
9BDP|1|A18S|U|1442
9BDP|1|A18S|C|1443
9BDP|1|A18S|U|1444
9BDP|1|A18S|U|1445
9BDP|1|A18S|A|1446
9BDP|1|A18S|G|1447

Current chains

Chain A18S

18S rRNA

Nearby chains

Chain ARAC

Receptor of activated protein C kinase 1

Chain AS16

Small ribosomal subunit protein uS9

Chain AS20

40S ribosomal protein S20