IL_9BDP_084

3D structure

PDB id

9BDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CGCUA*UAAAAG

Length

11 nucleotides

Bulged bases

9BDP|1|A18S|A|1825

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDP|1|A18S|C|1708
9BDP|1|A18S|G|1709
9BDP|1|A18S|C|1710
9BDP|1|A18S|U|1711
9BDP|1|A18S|A|1712
*
9BDP|1|A18S|U|1821
9BDP|1|A18S|A|1822
9BDP|1|A18S|A|1823
9BDP|1|A18S|A|1824
9BDP|1|A18S|A|1825
9BDP|1|A18S|G|1826

Current chains

Chain A18S

18S rRNA

Nearby chains

Chain A28S

Large subunit ribosomal RNA; LSU rRNA

Chain AL41

eL41

Chain ANG

Angiogenin

Chain AS23

40S ribosomal protein S23

Chain MRNA

mRNA