3D structure

PDB id
9BDP (explore in PDB, NAKB, or RNA 3D Hub)
Description
80S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAla
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
CUCCG*CG
Length
7 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9BDP|1|A28S|C|1694
9BDP|1|A28S|U|1695
9BDP|1|A28S|C|1696
9BDP|1|A28S|C|1720
9BDP|1|A28S|G|1721
*
9BDP|1|A28S|C|1841
9BDP|1|A28S|G|1842

Current chains

Chain A28S
28S rRNA

Nearby chains

Chain AL07
60S ribosomal protein L7
Chain AL18
Large ribosomal subunit protein eL18
Chain AL29
Large ribosomal subunit protein eL29

Coloring options:

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