IL_9BDP_177

3D structure

PDB id

9BDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

AUAUAGACAG*CCGAAU

Length

16 nucleotides

Bulged bases

9BDP|1|A28S|A|1960

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDP|1|A28S|A|1956
9BDP|1|A28S|U|1957
9BDP|1|A28S|A|1958
9BDP|1|A28S|U|1959
9BDP|1|A28S|A|1960
9BDP|1|A28S|G|1961
9BDP|1|A28S|A|1962
9BDP|1|A28S|C|1963
9BDP|1|A28S|A|1964
9BDP|1|A28S|G|1965
*
9BDP|1|A28S|C|2022
9BDP|1|A28S|C|2023
9BDP|1|A28S|G|2024
9BDP|1|A28S|A|2025
9BDP|1|A28S|A|2026
9BDP|1|A28S|U|2027

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain AL20

60S ribosomal protein L18a

Chain AL40

Large ribosomal subunit protein eL40

Chain ALP0

60S acidic ribosomal protein P0