IL_9BDP_178

3D structure

PDB id

9BDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GAUGGUGGCCAUGGAAGUCGGAAUCCGCUAAGG*CAC

Length

36 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDP|1|A28S|G|1969
9BDP|1|A28S|A|1970
9BDP|1|A28S|U|1971
9BDP|1|A28S|G|1972
9BDP|1|A28S|G|1973
9BDP|1|A28S|U|1974
9BDP|1|A28S|G|1975
9BDP|1|A28S|G|1976
9BDP|1|A28S|C|1977
9BDP|1|A28S|C|1978
9BDP|1|A28S|A|1979
9BDP|1|A28S|U|1980
9BDP|1|A28S|G|1981
9BDP|1|A28S|G|1982
9BDP|1|A28S|A|1983
9BDP|1|A28S|A|1984
9BDP|1|A28S|G|1985
9BDP|1|A28S|U|1986
9BDP|1|A28S|C|1987
9BDP|1|A28S|G|1988
9BDP|1|A28S|G|1989
9BDP|1|A28S|A|1990
9BDP|1|A28S|A|1991
9BDP|1|A28S|U|1992
9BDP|1|A28S|C|1993
9BDP|1|A28S|C|1994
9BDP|1|A28S|G|1995
9BDP|1|A28S|C|1996
9BDP|1|A28S|U|1997
9BDP|1|A28S|A|1998
9BDP|1|A28S|A|1999
9BDP|1|A28S|G|2000
9BDP|1|A28S|G|2001
*
9BDP|1|A28S|C|2016
9BDP|1|A28S|A|2017
9BDP|1|A28S|C|2018

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain AL12

uL11

Chain ALP0

60S acidic ribosomal protein P0

Chain TIRN

Transfer RNA; tRNA