IL_9BDP_264

3D structure

PDB id

9BDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GCAGAG*CGAUC

Length

11 nucleotides

Bulged bases

9BDP|1|A28S|C|5013

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDP|1|A28S|G|5012
9BDP|1|A28S|C|5013
9BDP|1|A28S|A|5014
9BDP|1|A28S|G|5015
9BDP|1|A28S|A|5016
9BDP|1|A28S|G|5017
*
9BDP|1|A28S|C|5032
9BDP|1|A28S|G|5033
9BDP|1|A28S|A|5034
9BDP|1|A28S|U|5035
9BDP|1|A28S|C|5036

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain AL19

60S ribosomal protein L19

Chain AL24

Ribosomal protein L24

Chain AS08

40S ribosomal protein S8