IL_9BDP_282
3D structure
- PDB id
- 9BDP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAla
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- ACCAC*GUCCCU
- Length
- 11 nucleotides
- Bulged bases
- 9BDP|1|A18S|C|1215, 9BDP|1|A18S|C|1216
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9BDP|1|A18S|A|1214
9BDP|1|A18S|C|1215
9BDP|1|A18S|C|1216
9BDP|1|A18S|A|1217
9BDP|1|A18S|C|1218
*
9BDP|1|A18S|G|1680
9BDP|1|A18S|U|1681
9BDP|1|A18S|C|1682
9BDP|1|A18S|C|1683
9BDP|1|A18S|C|1684
9BDP|1|A18S|U|1685
Current chains
- Chain A18S
- 18S rRNA
Nearby chains
- Chain AS05
- Ribosomal protein S5
- Chain AS16
- Small ribosomal subunit protein uS9
- Chain AS28
- 40S ribosomal protein S28
- Chain ETRN
- Transfer RNA; tRNA
- Chain MRNA
- mRNA
- Chain PTRN
- Transfer RNA; tRNA
Coloring options: