IL_9BDP_296

3D structure

PDB id

9BDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GUGAAACC*GGUGGAUC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDP|1|A28S|G|415
9BDP|1|A28S|U|416
9BDP|1|A28S|G|417
9BDP|1|A28S|A|418
9BDP|1|A28S|A|419
9BDP|1|A28S|A|420
9BDP|1|A28S|C|421
9BDP|1|A28S|C|422
*
9BDP|1|A58S|G|12
9BDP|1|A58S|G|13
9BDP|1|A58S|U|14
9BDP|1|A58S|G|15
9BDP|1|A58S|G|16
9BDP|1|A58S|A|17
9BDP|1|A58S|U|18
9BDP|1|A58S|C|19

Current chains

Chain A28S

28S rRNA

Chain A58S

5.8S rRNA

Nearby chains

Chain AL04

60S ribosomal protein L4

Chain AL17

60S ribosomal protein L17

Chain AL32

Large ribosomal subunit protein eL32