IL_9BDP_302

3D structure

PDB id

9BDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CCACCCC*GGGGGG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDP|1|A28S|C|1076
9BDP|1|A28S|C|1077
9BDP|1|A28S|A|1078
9BDP|1|A28S|C|1079
9BDP|1|A28S|C|1080
9BDP|1|A28S|C|1081
9BDP|1|A28S|C|1082
*
9BDP|1|A28S|G|1217
9BDP|1|A28S|G|1218
9BDP|1|A28S|G|1219
9BDP|1|A28S|G|1233
9BDP|1|A28S|G|1234
9BDP|1|A28S|G|1235

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain AL04

60S ribosomal protein L4

Chain AL06

60S ribosomal protein L6

Chain AL29

Large ribosomal subunit protein eL29