IL_9BDP_303

3D structure

PDB id

9BDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CGGGG*CGCCGUG

Length

12 nucleotides

Bulged bases

9BDP|1|A28S|G|1359, 9BDP|1|A28S|C|1378

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDP|1|A28S|C|1357
9BDP|1|A28S|G|1358
9BDP|1|A28S|G|1359
9BDP|1|A28S|G|1360
9BDP|1|A28S|G|1361
*
9BDP|1|A28S|C|1376
9BDP|1|A28S|G|1377
9BDP|1|A28S|C|1378
9BDP|1|A28S|C|1379
9BDP|1|A28S|G|1380
9BDP|1|A28S|U|1381
9BDP|1|A28S|G|1382

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain AL04

60S ribosomal protein L4

Chain AL13

Large ribosomal subunit protein eL13

Chain AL15

60S ribosomal protein L15

Chain AL28

60S ribosomal protein L27a