IL_9BDP_317

3D structure

PDB id

9BDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GCGAAGG*UGUUGACGC

Length

16 nucleotides

Bulged bases

9BDP|1|A28S|A|3663, 9BDP|1|A28S|U|3679, 9BDP|1|A28S|C|3683

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDP|1|A28S|G|3659
9BDP|1|A28S|C|3660
9BDP|1|A28S|G|3661
9BDP|1|A28S|A|3662
9BDP|1|A28S|A|3663
9BDP|1|A28S|G|3664
9BDP|1|A28S|G|3665
*
9BDP|1|A28S|U|3677
9BDP|1|A28S|G|3678
9BDP|1|A28S|U|3679
9BDP|1|A28S|U|3680
9BDP|1|A28S|G|3681
9BDP|1|A28S|A|3682
9BDP|1|A28S|C|3683
9BDP|1|A28S|G|3684
9BDP|1|A28S|C|3685

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain A18S

Small subunit ribosomal RNA; SSU rRNA

Chain AL02

60S ribosomal protein L8

Chain AL43

60S ribosomal protein L37a