IL_9BDP_319

3D structure

PDB id

9BDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

AGACAUGAG*CUGAUCGUUU

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDP|1|A28S|A|3945
9BDP|1|A28S|G|3946
9BDP|1|A28S|A|3947
9BDP|1|A28S|C|3948
9BDP|1|A28S|A|3949
9BDP|1|A28S|U|3950
9BDP|1|A28S|G|3951
9BDP|1|A28S|A|3952
9BDP|1|A28S|G|3953
*
9BDP|1|A28S|C|4059
9BDP|1|A28S|U|4060
9BDP|1|A28S|G|4061
9BDP|1|A28S|A|4062
9BDP|1|A28S|U|4063
9BDP|1|A28S|C|4064
9BDP|1|A28S|G|4065
9BDP|1|A28S|U|4066
9BDP|1|A28S|U|4067
9BDP|1|A28S|U|4068

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain AL36

60S ribosomal protein L36

Chain AS01

40S ribosomal protein S3a

Chain ETRN

Transfer RNA; tRNA