IL_9BDP_341

3D structure

PDB id

9BDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

AGGUGUAGAAUAAGU*ACUACU

Length

21 nucleotides

Bulged bases

9BDP|1|A28S|A|3962, 9BDP|1|A28S|A|3963, 9BDP|1|A28S|A|3965

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDP|1|A28S|A|3954
9BDP|1|A28S|G|3955
9BDP|1|A28S|G|3956
9BDP|1|A28S|U|3957
9BDP|1|A28S|G|3958
9BDP|1|A28S|U|3959
9BDP|1|A28S|A|3960
9BDP|1|A28S|G|3961
9BDP|1|A28S|A|3962
9BDP|1|A28S|A|3963
9BDP|1|A28S|U|3964
9BDP|1|A28S|A|3965
9BDP|1|A28S|A|3966
9BDP|1|A28S|G|3967
9BDP|1|A28S|U|3968
*
9BDP|1|A28S|A|4053
9BDP|1|A28S|C|4054
9BDP|1|A28S|U|4055
9BDP|1|A28S|A|4056
9BDP|1|A28S|C|4057
9BDP|1|A28S|U|4058

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain ETRN

Transfer RNA; tRNA