IL_9BKD_014

3D structure

PDB id

9BKD (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of human Pdcd4 bound to the 40S small ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GUACUU*AUGCCGAC

Length

14 nucleotides

Bulged bases

9BKD|1|A|C|142

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BKD|1|A|G|130
9BKD|1|A|U|140
9BKD|1|A|A|141
9BKD|1|A|C|142
9BKD|1|A|U|143
9BKD|1|A|U|144
*
9BKD|1|A|A|175
9BKD|1|A|U|176
9BKD|1|A|G|177
9BKD|1|A|C|178
9BKD|1|A|C|179
9BKD|1|A|G|180
9BKD|1|A|A|181
9BKD|1|A|C|182

Current chains

Chain A

18S rRNA

Nearby chains

Chain S

Small ribosomal subunit protein eS6