IL_9BKD_031

3D structure

PDB id

9BKD (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of human Pdcd4 bound to the 40S small ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GACU*GAGGCC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BKD|1|A|G|535
9BKD|1|A|A|536
9BKD|1|A|C|537
9BKD|1|A|U|538
*
9BKD|1|A|G|544
9BKD|1|A|A|545
9BKD|1|A|G|546
9BKD|1|A|G|547
9BKD|1|A|C|548
9BKD|1|A|C|549

Current chains

Chain A

18S rRNA

Nearby chains

Chain F

Small ribosomal subunit protein eS30