IL_9BKD_066

3D structure

PDB id

9BKD (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of human Pdcd4 bound to the 40S small ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

AUUG*CUCGAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BKD|1|A|A|1287
9BKD|1|A|U|1288
9BKD|1|A|U|1289
9BKD|1|A|G|1290
*
9BKD|1|A|C|1309
9BKD|1|A|U|1310
9BKD|1|A|C|1311
9BKD|1|A|G|1312
9BKD|1|A|A|1313
9BKD|1|A|U|1314

Current chains

Chain A

18S rRNA

Nearby chains

Chain a

Small ribosomal subunit protein eS10

Chain i

40S ribosomal protein S29

Chain k

Ubiquitin-40S ribosomal protein S27a

Chain m

40S ribosomal protein S12