IL_9BLN_016

3D structure

PDB id

9BLN (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of human Pdcd4 bound to the 40S-eIF4A-eIF3-eIF1 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UGGAUAAC*GCUAAUA(OMC)A

Length

17 nucleotides

Bulged bases

9BLN|1|A|U|172

QA status

Modified nucleotides: OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BLN|1|A|U|144
9BLN|1|A|G|145
9BLN|1|A|G|146
9BLN|1|A|A|147
9BLN|1|A|U|148
9BLN|1|A|A|149
9BLN|1|A|A|150
9BLN|1|A|C|151
*
9BLN|1|A|G|167
9BLN|1|A|C|168
9BLN|1|A|U|169
9BLN|1|A|A|170
9BLN|1|A|A|171
9BLN|1|A|U|172
9BLN|1|A|A|173
9BLN|1|A|OMC|174
9BLN|1|A|A|175

Current chains

Chain A

rRNA

Nearby chains

Chain S

Small ribosomal subunit protein eS6

Chain T

Small ribosomal subunit protein eS24