IL_9BLN_044
3D structure
- PDB id
- 9BLN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of human Pdcd4 bound to the 40S-eIF4A-eIF3-eIF1 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GAAAAAA(5MU)UA*UACCGCAGC
- Length
- 19 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 5MU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9BLN|1|A|G|807
9BLN|1|A|A|808
9BLN|1|A|A|809
9BLN|1|A|A|810
9BLN|1|A|A|811
9BLN|1|A|A|812
9BLN|1|A|A|813
9BLN|1|A|5MU|814
9BLN|1|A|U|815
9BLN|1|A|A|816
*
9BLN|1|A|U|848
9BLN|1|A|A|849
9BLN|1|A|C|850
9BLN|1|A|C|851
9BLN|1|A|G|852
9BLN|1|A|C|853
9BLN|1|A|A|854
9BLN|1|A|G|855
9BLN|1|A|C|856
Current chains
- Chain A
- rRNA
Nearby chains
- Chain B
- Small ribosomal subunit protein uS17
- Chain C
- Small ribosomal subunit protein eS4, X isoform
- Chain D
- Small ribosomal subunit protein uS4
- Chain J
- Small ribosomal subunit protein uS8
Coloring options: