IL_9BLN_067

3D structure

PDB id

9BLN (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of human Pdcd4 bound to the 40S-eIF4A-eIF3-eIF1 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

AUUG*CUCGAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BLN|1|A|A|1287
9BLN|1|A|U|1288
9BLN|1|A|U|1289
9BLN|1|A|G|1290
*
9BLN|1|A|C|1309
9BLN|1|A|U|1310
9BLN|1|A|C|1311
9BLN|1|A|G|1312
9BLN|1|A|A|1313
9BLN|1|A|U|1314

Current chains

Chain A

rRNA

Nearby chains

Chain a

Small ribosomal subunit protein eS10

Chain i

Small ribosomal subunit protein uS14

Chain k

Ubiquitin-40S ribosomal protein S27a

Chain m

Small ribosomal subunit protein eS12