IL_9BS0_047
3D structure
- PDB id
- 9BS0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- YphC-treated 45SYphC particle. Class 5
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CUAAG*CGAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9BS0_047 not in the Motif Atlas
- Homologous match to IL_4WF9_051
- Geometric discrepancy: 0.1501
- The information below is about IL_4WF9_051
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- UAA/GAN
- Motif group
- IL_89021.4
- Basepair signature
- cWW-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 8
Unit IDs
9BS0|1|A|C|1390
9BS0|1|A|U|1391
9BS0|1|A|A|1392
9BS0|1|A|A|1393
9BS0|1|A|G|1394
*
9BS0|1|A|C|1415
9BS0|1|A|G|1416
9BS0|1|A|A|1417
9BS0|1|A|U|1418
9BS0|1|A|G|1419
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain C
- Large ribosomal subunit protein uL2
- Chain U
- Large ribosomal subunit protein bL34
Coloring options: